remove translation of protein under spherical boundary conditions

From: kakali sen (kakalisen_at_gmail.com)
Date: Fri Aug 19 2011 - 04:39:24 CDT

Dear All,

I was trying to run a long NVT simulation of a protein in a water sphere
under spherical boundary conditions and the protein is translating (which I
assume is common). Is there any way to get rid of the translational motion
under the spherical boundary conditions for simulation?

thanks in advance,
kakali.

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 05:24:19 CST