Re: vmd-l: Re: MMTools

From: Chathurika Abeyrathne (c.abeyrathne_at_student.unimelb.edu.au)
Date: Wed Aug 17 2011 - 21:07:21 CDT

 Ok. I'm trying to find a tool to calculate the correlation function of
dipole moment.
I can find the dipole moment using VMD. I couldn't find a tool to calculate
the auto-correlation function.

Regards,
Chathurika.

On Thu, Aug 18, 2011 at 11:28 AM, Axel Kohlmeyer <akohlmey_at_gmail.com> wrote:

> On Thu, 2011-08-18 at 10:02 +1000, Chathurika Abeyrathne wrote:
> >
> > It is an analysis tool for MD simulations.
>
>
> > It's on this web site: http://www.ks.uiuc.edu/Research/MMTools/
>
> that is the _plan_ for an analysis tool and that page is
> probably 10 years old. if you look closer you see that
> all references are from the last century.
>
> many of the features described are available in VMD
> or as standalone codes.
>
> axel.
>
>
> >
> > Regards,
> > Chathurika.
> >
> >
> >
> > On Thu, Aug 18, 2011 at 1:15 AM, Axel Kohlmeyer <akohlmey_at_gmail.com>
> > wrote:
> > first off. please do not cross-post until you have a very,
> > _very_ good reason (and you don't).
> >
> > On Tue, Aug 16, 2011 at 9:03 PM, Chathurika Abeyrathne
> > <c.abeyrathne_at_student.unimelb.edu.au> wrote:
> > >
> > > Hi,
> > >
> > > Has anyone used MMTools ? How can I access it ?
> >
> > what MMtools are you talking about?
> > and what has this to do with either NAMD or VMD?
> >
> > thanks,
> > axel.
> >
> >
> >
> > >
> > > Thanks.
> > >
> > >
> > > Regards,
> > > Chathurika.
> > >
> >
> >
> >
> > --
> > Dr. Axel Kohlmeyer
> > akohlmey_at_gmail.com http://goo.gl/1wk0
> >
> > Institute for Computational Molecular Science
> > Temple University, Philadelphia PA, USA.
> >
> >
>
> --
> Dr. Axel Kohlmeyer
> akohlmey_at_gmail.com http://goo.gl/1wk0
>
> Institute for Computational Molecular Science
> Temple University, Philadelphia PA, USA.
>
>

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