Re: distortion of some bonds during structure preparation

From: bharat gupta (bharat.85.monu_at_gmail.com)
Date: Mon Jul 04 2011 - 03:36:39 CDT

Hi,

I generated a pdb and psf of Green fluorescent protein with one mutated
residue (Arg 85). After checking the structure in VMD I found , that the
bond between Arg 85 and more residue Tyr 82 got distorted.. During the
structure generation I didn't get any error... how to rectify this ??

-- 
Bharat
Ph.D. Candidate

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 05:24:09 CST