Re: a bundle of coor files

From: Rajan Vatassery (rajan_at_umn.edu)
Date: Sat Jul 02 2011 - 16:26:32 CDT

Dear Massimiliano,
        Check out this thread on the subject of the .coor files:
http://www.ks.uiuc.edu/Research/namd/mailing_list/namd-l/13295.html

It contains 2 possible solutions that you may find useful. I know that
the python script included in this thread works well and it's fairly
short (hopefully that translates into ease of understanding).

Best of luck,

rajan

On Sat, 2011-07-02 at 19:21 +0100, Massimiliano Porrini wrote:
> Dear all,
>
> I have generated 500 NAMD coordinates files which have the
> following type of name:
>
> min.N.coor
>
> where N=1,...,500 .
>
> and in the runs I used Amber force field parameter file.
>
> I would like to convert them into PDB file format.
>
> Can anybody give me a hint on which is an efficient way to do that?
>
> Thank you in advance.
>
> Best regards,
> MP
>
>
>

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 05:24:09 CST