From: snoze pa (snoze.pa_at_gmail.com)
Date: Fri May 13 2011 - 16:34:16 CDT
Dear NAMD Users,
I want to start a MD simulation. In my system only 30 residues are part of
membrane and rest of the 400 residues are not part of the membrane. Shall I
use membrane in my simulation or simply a water box will help. On other hand
I can remove 30 residue segment and use water box method. But I would
prefer to use simulation with membrane.
I would highly appreciate your suggestions
Thanks in advance and have a great weekend.
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