Re: how to cenvert NAMD binary coordinate file to text file

From: Ajasja Ljubetič (ajasja.ljubetic_at_gmail.com)
Date: Thu Oct 21 2010 - 03:24:19 CDT

Hi,

If you want just one frame, the easiest way is to right-click on the
molecule in the main window and choose "Save Coordinates..." and save it as
a PDB.

further hints:
"$sel writepdb" or "animate write file name"

regards,
Ajasja
On Thu, Oct 21, 2010 at 09:27, jnsong <jnsong_at_itcs.ecnu.edu.cn> wrote:

> Deal all,
>
> Recently, I have done a simulation of my membrane system with NAMD-2.7b3.
> and I've got a binary restart coordinate file.
> Now, I want to get coordinates in it to further analysis other than using
> VMD.
> Would you please tell me the storage format in the binary file or at leat,
> give me some hint?
>
> Thanks very much!
>
> Jianing
>

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