Re: distance colvar

From: Jérôme Hénin (jhenin_at_ifr88.cnrs-mrs.fr)
Date: Mon Jun 07 2010 - 06:27:00 CDT

Hi Neelanjana,

That is correct. I need to change the documentation, which should
provide this information.

Best,
Jerome

On 7 June 2010 10:07, Neelanjana Sengupta <senguptan_at_gmail.com> wrote:
> Dear NAMD community,
>
> When the collective variable is a 'distance' between 2 atom groups, each
> containing more than one atom (eg. the sidechains of two regions of a
> protein), am I right in assuming that the distance refers to the centers of
> mass distance of the two groups?
>
> Thanks,
> Neelanjana Sengupta
>

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