Re: duplicate residue key ALA will be ignored

From: flavio seixas (oivalf_nix_at_yahoo.com)
Date: Tue May 18 2010 - 11:21:07 CDT

It looks like you are using different parameters files: One in for the psf generator, another for the dinamics.

Best,

Flavio

--- On Mon, 5/17/10, Mert Gür <gurmert_at_gmail.com> wrote:

> From: Mert Gür <gurmert_at_gmail.com>
> Subject: namd-l: duplicate residue key ALA will be ignored
> To: "NAMD list" <namd-l_at_ks.uiuc.edu>
> Date: Monday, May 17, 2010, 10:42 PM
> Hi everyone,
> I hadn't realized this warning before.
> When I type
> topology top_all27_prot_lipid.inp
>
> into the TKConsole. I get the following warning.
>
> duplicate type key CC2
> duplicate type key NS1
> duplicate type key NS2
> duplicate residue key ALA will be ignored
> duplicate residue key ARG will be ignored
> duplicate residue key ASN will be ignored
> duplicate residue key ASP will be ignored
>
> Can anybody tell me what the program tries to tell me.
> Best,
>
>

      

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