CPU usage when exec function is used

From: daniel aguayo (bioquimico_at_gmail.com)
Date: Fri Jan 08 2010 - 14:48:42 CST

Dear All
      We are trying to execute an external bash script between "run" stages
(example below) with the exec tcl command. But when the exec process is
executed the CPUs are on 100% usage with namd2 process.. then our script
cant run well. Can someone give us a shortcut to stop namd for starving CPU
or
we just have to deal with this issue?

BTW: namd is running on a multiple CPU / nodes with OPENMPI.

Tks a lot ...

Daniel Aguayo V.
CBSM - UTAL

#######

run 500000
output dend_1n_eq
set ruta [exec pwd ]
if { [catch {exec "$ruta/buildfilesprueba.sh"} fid] } {
   puts "Error \n$fid"
   puts "Information about it: $::errorInfo"
   exit 1
 }
run 50000

########

-- 
saludos desde el fin del mundo

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