Re: Compiling on G5 using xlC

From: klsale (klsale_at_sandia.gov)
Date: Thu Feb 26 2004 - 15:38:47 CST

Ok, this helped and NAMD compiles up to the following point:

NAMD_PLATFORM=\"MacOSX-PPC\" -O -o obj/FreeEnergyGroup.o -c
src/FreeEnergyGroup.C

 Second exception at 0x0000387C

 EXCEPTION of type: SIGSEGV 11 in exception handler at 0000387C. Regs:

 FFFFFFFE 00C48450 00000000 FFFFFFFF 00000000 00000001 00000030 00753554

 00BD7C04 00C4841D 20202020 00BD7A00 00C484B2 00BD8AF0 00BD8AF0 00C4C270

 00000002 00000000 0000000C 0000000F 00000000 00000004 00000000 00C49A4E

 20202020 20200000 005EA3C0 00C4C27C 0074E020 00000000 00000002 00003554

 resume: cr: lr: ctr: xer: fpscr: msr: mq:

 00000000 48000242 0000370C 9007404C 20000000 00000000 0200D030 00000000

 Traceback:

 Line ? Disp 0000387C _flush_be_msgs Dsa: 00C48450

 Line ? Disp 000026A0 __Axerror Dsa: 00C4ACD0

 --- End of call chain ---

 

 Original EXCEPTION details possibly follow.

 Exception of type: SIGBUS 10 at 00151888. Regs:

 00E3EDA0 A000932C 0015D46C 000246D2 00151810 00000000 00000000 00000000

 00000000 00000000 00000000 00000000 00000000 00000000 00000001 00BD8B70

 00C81310 007D29B4 007D2D14 007D1E18 00C25E98 00C81310 00000000 0015183C

 resume: cr: lr: ctr: xer: fpscr: msr: mq:

 00000000 24000442 0015183C 90009440 00000000 00000000 0000D930 00000000

 Traceback:

 Line ? Disp 00151888 _process_compilation_unit Dsa: BFFFF780

 --- End of call chain ---

make: *** [obj/FreeEnergyGroup.o] Error 218

 

On 2/26/04 12:16 PM, "Gengbin Zheng" <gzheng_at_ks.uiuc.edu> wrote:

>
> I think I saw this before. Either try download charm++ and NAMD from cvs.
> or try adding -qstaticinline in NAMD config file MacOSX-PPC-xlC.arch.
> And maybe in the charm config file at:
> charm/src/arch/net-ppc-darwin/xx-xlc.sh.
>
> Gengbin
>
> On Thu, 26 Feb 2004, klsale wrote:
>
>> I am trying to compile NAMD on a Mac G5 running under OSX 10.2.6. I am
>> getting the following errors:
>>
>>
>> "/Volumes/data/charm/net-ppc-darwin-xlc/include/lbdb.h", line 348.13:
>> 1540-0704 (S) The definitions of "void LDOMHandle::pup(PUP::er &)" and "void
>> _LDObjid::pup(PUP::er &)" have the same linkage signature "pup".
>>
>> "/Volumes/data/charm/net-ppc-darwin-xlc/include/lbdb.h", line 364.13:
>> 1540-0704 (S) The definitions of "void LDObjHandle::pup(PUP::er &)" and
>> "void _LDObjid::pup(PUP::er &)" have the same linkage signature "pup".
>>
>> "/Volumes/data/charm/net-ppc-darwin-xlc/include/lbdb.h", line 370.13:
>> 1540-0704 (S) The definitions of "void LDObjData::pup(PUP::er &)" and "void
>> _LDObjid::pup(PUP::er &)" have the same linkage signature "pup".
>>
>> "/Volumes/data/charm/net-ppc-darwin-xlc/include/lbdb.h", line 378.13:
>> 1540-0704 (S) The definitions of "void _LDCommDesc::pup(PUP::er &)" and
>> "void _LDObjid::pup(PUP::er &)" have the same linkage signature "pup".
>>
>>
>> Charm++ compiled without a problem.
>>
>> Also, were do Tcl and FFTW need to be installed? Does NAMD "look" for these
>> during compilation?
>>
>> Thanks,
>>
>> Ken
>>
>
>
>

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