How to treat the terminal residue psfgen in NAMD~

From: κ (weikai_at_ustc.edu)
Date: Mon Nov 29 2004 - 20:11:37 CST

Hi,all:
   I have a question that :in the charmm topology file all the RNA residues contain a phospholipid bond. But at the end of the RNA molecule the terminal doesn't have the end phospholipid bond ,in the psfgen it contain this error:
ERROR: Missing atoms for bond O3'(0) P(1) in residue CYT:172(CYT172 is the terminal residue of a RNA)
How can I treat the problem.

                                         thanks.
                                                           Kai

--
USTC Alumni Email System 

This archive was generated by hypermail 2.1.6 : Wed Feb 29 2012 - 15:38:02 CST