Re: Can we fix the position of two atoms while minimization?

From: Brian Bennion (brian_at_youkai.llnl.gov)
Date: Wed Sep 29 2004 - 18:00:43 CDT

See the users guide...

http://www.ks.uiuc.edu/Research/namd/current/ug/node27.html#7138

very easy to do!

Regards
Brian

On Wed, 29 Sep 2004, Shahid Qamar wrote:

>
>
> Hi,
> I am trying to minimize a system and want to keep the position of any two
> atoms fix. I want that position does not change while I minimize it.
> I am using namd with Amber topology and coordinates file. I also use VMD to
> look the molecule.
> Any idea about it?
>
>
> Thanks
>
> Shahid
>
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*****************************************************************
**Brian Bennion, Ph.D. **
**Computational and Systems Biology Division **
**Biology and Biotechnology Research Program **
**Lawrence Livermore National Laboratory **
**P.O. Box 808, L-448 bennion1_at_llnl.gov **
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