From: Gengbin Zheng (gzheng_at_ks.uiuc.edu)
Date: Fri Jun 11 2004 - 20:57:01 CDT
Hi Sichun,
The NAMD binary you compiled is just a MPI program. You have to figure out
how to run a MPI program (with Myrinet) with your administrator. It is
very likely that you can not run your job interactively, you have to
submit the job via some job scheduler.
Gengbin
On Fri, 11 Jun 2004, Sichun Yang wrote:
>
> Follow up my last email.
>
> I have been compiling charm++ for NAMD on ia64.
> It went through using the "./build charm++ mpi-linux-ia64 gm -O
> -DCMK_OPTIMIZE=1".
>
> However, the megatest failed when I try to have a test run on 4
> processors,
> it asks for passwords.
> Any suggestion is welcome. Thanks,
> -Sichun
>
> charm++/megatest> ./charmrun +p4 ./pgm
> Running on 4 processors: ./pgm
> Password: Password: Password: Password:
>
>
> On Fri, 11 Jun 2004, Sichun Yang wrote:
>
> >
> > Dear all,
> >
> > when i try to install charm,
> > here are my error messages. any suggestion is welcome.
> > Thanks,
> > -Sichun
> >
> >
> > NAMD_2.5_Source/charm> ./build charm++ net-linux -O -DCMK_OPTIMIZE=1
> > Copying src/scripts/Makefile to net-linux/tmp
> > Soft-linking over bin
> > Soft-linking over lib
> > Soft-linking over lib_so
> > Soft-linking over include
> > Soft-linking over tmp
> > Generating net-linux/tmp/conv-mach-pre.sh
> > Performing 'make charm++ OPTS= -O -DCMK_OPTIMIZE=1' in net-linux/tmp
> > touch basics
> > ../bin/charmc -O -DCMK_OPTIMIZE=1 -build-shared convcore.c
> > convcore.c: In function `CmiTimerInit':
> > converse.h:424: inconsistent operand constraints in an `asm'
> > converse.h:424: inconsistent operand constraints in an `asm'
> > converse.h:424: inconsistent operand constraints in an `asm'
> > converse.h:424: inconsistent operand constraints in an `asm'
> > converse.h:424: inconsistent operand constraints in an `asm'
> > Fatal Error by charmc in directory
> > /users/ux453965/soft/NAMD_2.5_Source/charm/net-linux/tmp
> > Command gcc -D__CHARMC__=1 -DCMK_OPTIMIZE=1 -O -I../bin/../include -c
> > convcore.c -o convcore.o returned error code 1
> > charmc exiting...
> > make: *** [convcore.o] Error 1
> > -------------------------------------------------
> > Charm++ NOT BUILT. Either cd into net-linux/tmp and try
> > to resolve the problems yourself, visit
> > http://charm.cs.uiuc.edu/
> > for more information. Otherwise, email the developers at ppl_at_cs.uiuc.edu
> >
> >
>
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