From: Jim Phillips (jim_at_ks.uiuc.edu)
Date: Fri Dec 19 2003 - 16:26:31 CST
I'm sure all of the parameters are there, but you should use the newer
CHARMM 27 force field for nucleic acids and lipids, i.e.,
top_all27_prot_na.inp and par_all27_prot_na.inp, rather than 22.
-Jim
On Fri, 19 Dec 2003, Bartosz Dobrzelecki wrote:
> Which topology files and which parameters should I use for simulating
> protein and RNA ?
>
> I have used par_all22_prot_na.inp and top_all22_prot_na.inp
>
> but it seems like a lot of parameters for na residues defined in
> topology are missing in parameters file.
>
> Regards,
> Bartek
>
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