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Class Members
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File Members
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Functions
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Variables
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Typedefs
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Enumerations
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Enumeration values
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Defines
a
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b
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c
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d
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e
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f
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i
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k
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l
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m
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n
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p
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r
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s
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t
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v
- a -
ACCEPTOR :
structures.h
ANGLE :
structures.h
- b -
BOND :
structures.h
- c -
CMAP_PHI_0 :
ComputeCrossterms.C
CMAP_PSI_0 :
ComputeCrossterms.C
CMAP_SETUP_DIM :
ComputeCrossterms.C
CMAP_SPACING :
ComputeCrossterms.C
CMAP_TABLE_DIM :
ComputeCrossterms.C
computeAnglesType :
ComputeMap.h
computeBondsType :
ComputeMap.h
computeConsForceType :
ComputeMap.h
computeConsTorqueType :
ComputeMap.h
computeCrosstermsType :
ComputeMap.h
computeCylindricalBCType :
ComputeMap.h
computeDihedralsType :
ComputeMap.h
computeEFieldType :
ComputeMap.h
computeErrorType :
ComputeMap.h
computeEwaldType :
ComputeMap.h
computeExtType :
ComputeMap.h
computeFullDirectType :
ComputeMap.h
computeGlobalType :
ComputeMap.h
computeGridForceType :
ComputeMap.h
computeImpropersType :
ComputeMap.h
COMPUTEMAX :
LdbCoordinator.h
computeNonbondedPairType :
ComputeMap.h
computeNonbondedSelfType :
ComputeMap.h
computePmeType :
ComputeMap.h
computeRestraintsType :
ComputeMap.h
computeSelfAnglesType :
ComputeMap.h
computeSelfBondsType :
ComputeMap.h
computeSelfCrosstermsType :
ComputeMap.h
computeSelfDihedralsType :
ComputeMap.h
computeSelfImpropersType :
ComputeMap.h
computeSphericalBCType :
ComputeMap.h
computeStirType :
ComputeMap.h
computeTclBCType :
ComputeMap.h
CROSSTERM :
structures.h
- d -
DIHEDRAL :
structures.h
DONOR :
structures.h
dummyTag :
Broadcasts.h
- e -
EXCLUSION :
structures.h
- f -
FREE_RANGE :
ParseOptions.h
- i -
IMD_DISCONNECT :
imd.h
IMD_ENERGIES :
imd.h
IMD_FCOORDS :
imd.h
IMD_GO :
imd.h
IMD_HANDSHAKE :
imd.h
IMD_IOERROR :
imd.h
IMD_KILL :
imd.h
IMD_MDCOMM :
imd.h
IMD_PAUSE :
imd.h
IMD_TRATE :
imd.h
IMPROPER :
structures.h
- k -
k_fs :
FreeEnergyParse.h
k_ns :
FreeEnergyParse.h
k_ps :
FreeEnergyParse.h
kAccumTime :
FreeEnergyParse.h
kAlsoTrue :
FreeEnergyEnums.h
kAngle :
FreeEnergyParse.h
kAngleBound :
FreeEnergyParse.h
kAnglePMF :
FreeEnergyParse.h
kAtom :
FreeEnergyParse.h
kAtomName :
FreeEnergyParse.h
kAtomNameList :
FreeEnergyParse.h
kDihe :
FreeEnergyParse.h
kDiheBound :
FreeEnergyParse.h
kDihePMF :
FreeEnergyParse.h
kDist :
FreeEnergyParse.h
kDistBound :
FreeEnergyParse.h
kDistPMF :
FreeEnergyParse.h
kDown :
FreeEnergyEnums.h
kEndGroup :
FreeEnergyParse.h
kEquilTime :
FreeEnergyParse.h
kFade :
FreeEnergyEnums.h
kFalse :
FreeEnergyEnums.h
kGrow :
FreeEnergyEnums.h
kLambda :
FreeEnergyParse.h
kLambdaT :
FreeEnergyParse.h
kLower :
FreeEnergyEnums.h
kNAMD_Problem :
FreeEnergyEnums.h
kNoGrow :
FreeEnergyEnums.h
kNoPrint :
FreeEnergyParse.h
kNoProblem :
FreeEnergyEnums.h
kNumRepeats :
FreeEnergyParse.h
kParsingProblem :
FreeEnergyEnums.h
kPosi :
FreeEnergyParse.h
kPosiBound :
FreeEnergyParse.h
kPosiPMF :
FreeEnergyParse.h
kPrint :
FreeEnergyParse.h
kRandom :
FreeEnergyVector.h
kRegular :
FreeEnergyVector.h
kResidue :
FreeEnergyParse.h
kResidueRange :
FreeEnergyParse.h
kStartGroup :
FreeEnergyParse.h
kStepDown :
FreeEnergyEnums.h
kStepFade :
FreeEnergyEnums.h
kStepGrow :
FreeEnergyEnums.h
kStepUp :
FreeEnergyEnums.h
kStop :
FreeEnergyEnums.h
kTask :
FreeEnergyParse.h
kTime :
FreeEnergyParse.h
kTrue :
FreeEnergyEnums.h
kUnknownBound :
FreeEnergyEnums.h
kUnknownItem :
FreeEnergyParse.h
kUnknownPmf :
FreeEnergyParse.h
kUnknownRestr :
FreeEnergyParse.h
kUnknownTask :
FreeEnergyEnums.h
kUnknownTime :
FreeEnergyParse.h
kUp :
FreeEnergyEnums.h
kUpper :
FreeEnergyEnums.h
- l -
LDB_COMPUTES :
LdbCoordinator.h
LDB_PATCHES :
LdbCoordinator.h
- m -
maxPatchDepends :
WorkDistrib.h
minimizeCoefficientTag :
Broadcasts.h
momentumCorrectionTag :
Broadcasts.h
- n -
N_ANGSTROM :
ParseOptions.h
N_EV :
ParseOptions.h
N_FSEC :
ParseOptions.h
N_HOUR :
ParseOptions.h
N_KCAL :
ParseOptions.h
N_KELVIN :
ParseOptions.h
N_KJOULE :
ParseOptions.h
N_METER :
ParseOptions.h
N_MIN :
ParseOptions.h
N_NANOMETER :
ParseOptions.h
N_NSEC :
ParseOptions.h
N_SEC :
ParseOptions.h
N_UNIT :
ParseOptions.h
N_UNITS_UNDEFINED :
ParseOptions.h
NEGATIVE :
ParseOptions.h
NOT_NEGATIVE :
ParseOptions.h
NOT_POSITIVE :
ParseOptions.h
notUsed :
AtomMap.h
- p -
PATCHMAX :
LdbCoordinator.h
positionRescaleFactorTag :
Broadcasts.h
POSITIVE :
ParseOptions.h
PROCESSORMAX :
LdbCoordinator.h
- r -
REDUCTION_ANGLE_CHECKSUM :
ReductionMgr.h
REDUCTION_ANGLE_ENERGY :
ReductionMgr.h
REDUCTION_ANGULAR_MOMENTUM :
ReductionMgr.h
REDUCTION_ATOM_CHECKSUM :
ReductionMgr.h
REDUCTION_BC_ENERGY :
ReductionMgr.h
REDUCTION_BOND_CHECKSUM :
ReductionMgr.h
REDUCTION_BOND_ENERGY :
ReductionMgr.h
REDUCTION_CENTERED_KINETIC_ENERGY :
ReductionMgr.h
REDUCTION_COMPUTE_CHECKSUM :
ReductionMgr.h
REDUCTION_CROSSTERM_CHECKSUM :
ReductionMgr.h
REDUCTION_CROSSTERM_ENERGY :
ReductionMgr.h
REDUCTION_DIHEDRAL_CHECKSUM :
ReductionMgr.h
REDUCTION_DIHEDRAL_ENERGY :
ReductionMgr.h
REDUCTION_ELECT_ENERGY :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_F :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_PME_TI :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_SLOW :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_SLOW_F :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_SLOW_TI_1 :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_SLOW_TI_2 :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_TI_1 :
ReductionMgr.h
REDUCTION_ELECT_ENERGY_TI_2 :
ReductionMgr.h
REDUCTION_EXCLUSION_CHECKSUM :
ReductionMgr.h
REDUCTION_EXT_FORCE_NBOND :
ReductionMgr.h
REDUCTION_EXT_FORCE_NORMAL :
ReductionMgr.h
REDUCTION_EXT_FORCE_SLOW :
ReductionMgr.h
REDUCTION_HALFSTEP_KINETIC_ENERGY :
ReductionMgr.h
REDUCTION_HALFSTEP_MOMENTUM :
ReductionMgr.h
REDUCTION_IMPROPER_CHECKSUM :
ReductionMgr.h
REDUCTION_IMPROPER_ENERGY :
ReductionMgr.h
REDUCTION_INT_CENTERED_KINETIC_ENERGY :
ReductionMgr.h
REDUCTION_INT_HALFSTEP_KINETIC_ENERGY :
ReductionMgr.h
REDUCTION_INT_VIRIAL_NBOND :
ReductionMgr.h
REDUCTION_INT_VIRIAL_NORMAL :
ReductionMgr.h
REDUCTION_INT_VIRIAL_SLOW :
ReductionMgr.h
REDUCTION_LJ_ENERGY :
ReductionMgr.h
REDUCTION_LJ_ENERGY_F :
ReductionMgr.h
REDUCTION_LJ_ENERGY_TI_1 :
ReductionMgr.h
REDUCTION_LJ_ENERGY_TI_2 :
ReductionMgr.h
REDUCTION_MARGIN_VIOLATIONS :
ReductionMgr.h
REDUCTION_MAX_RESERVED :
ReductionMgr.h
REDUCTION_MAX_SET_ID :
ReductionMgr.h
REDUCTION_MIN_F_DOT_F :
ReductionMgr.h
REDUCTION_MIN_F_DOT_V :
ReductionMgr.h
REDUCTION_MIN_HUGE_COUNT :
ReductionMgr.h
REDUCTION_MIN_V_DOT_V :
ReductionMgr.h
REDUCTION_MISC_ENERGY :
ReductionMgr.h
REDUCTION_MOMENTUM :
ReductionMgr.h
REDUCTION_MOMENTUM_MASS :
ReductionMgr.h
REDUCTION_PAIR_ELECT_FORCE :
ReductionMgr.h
REDUCTION_PAIR_VDW_FORCE :
ReductionMgr.h
REDUCTION_PAIRLIST_WARNINGS :
ReductionMgr.h
REDUCTION_SMD_ENERGY :
ReductionMgr.h
REDUCTION_STRAY_CHARGE_ERRORS :
ReductionMgr.h
REDUCTION_VIRIAL_NBOND :
ReductionMgr.h
REDUCTION_VIRIAL_NORMAL :
ReductionMgr.h
REDUCTION_VIRIAL_SLOW :
ReductionMgr.h
REDUCTIONS_BASIC :
ReductionMgr.h
REDUCTIONS_PPROF_BONDED :
ReductionMgr.h
REDUCTIONS_PPROF_INTERNAL :
ReductionMgr.h
REDUCTIONS_PPROF_KINETIC :
ReductionMgr.h
REDUCTIONS_PPROF_NONBONDED :
ReductionMgr.h
REDUCTIONS_USER1 :
ReductionMgr.h
REDUCTIONS_USER2 :
ReductionMgr.h
- s -
SCRIPT_CHECKPOINT :
Broadcasts.h
SCRIPT_DUMMY :
Broadcasts.h
SCRIPT_END :
Broadcasts.h
SCRIPT_MEASURE :
Broadcasts.h
SCRIPT_MINIMIZE :
Broadcasts.h
SCRIPT_OUTPUT :
Broadcasts.h
SCRIPT_REINITVELS :
Broadcasts.h
SCRIPT_RELOADCHARGES :
Broadcasts.h
SCRIPT_RESCALEVELS :
Broadcasts.h
SCRIPT_REVERT :
Broadcasts.h
SCRIPT_RUN :
Broadcasts.h
scriptBarrierTag :
Broadcasts.h
- t -
tcoupleCoefficientTag :
Broadcasts.h
- v -
velocityRescaleFactorTag :
Broadcasts.h
Generated on Thu Jul 3 04:08:16 2008 for NAMD by
1.3.9.1
1.3.9.1