| addForceToMomentum(BigReal, const int ftag=Results::normal, const int useSaved=0, const int pressure=0) | Sequencer | [protected] |
| addMovDragToPosition(BigReal) | Sequencer | [protected] |
| addRotDragToPosition(BigReal) | Sequencer | [protected] |
| addVelocityToPosition(BigReal) | Sequencer | [protected] |
| algorithm(void) | Sequencer | [protected, virtual] |
| awaken(void) | Sequencer | [inline] |
| berendsenPressure(int) | Sequencer | [protected] |
| berendsenPressure_count | Sequencer | [protected] |
| broadcast | Sequencer | [protected] |
| checkpoint_berendsenPressure_count | Sequencer | [protected] |
| collection | Sequencer | [protected] |
| correctMomentum(int step, BigReal drifttime) | Sequencer | [protected] |
| cycleBarrier(int, int) | Sequencer | [protected] |
| HomePatch class | Sequencer | [friend] |
| integrate() | Sequencer | [protected] |
| langevinPiston(int) | Sequencer | [protected] |
| langevinVelocities(BigReal) | Sequencer | [protected] |
| langevinVelocitiesBBK1(BigReal) | Sequencer | [protected] |
| langevinVelocitiesBBK2(BigReal) | Sequencer | [protected] |
| ldbSteps | Sequencer | [protected] |
| maximumMove(BigReal) | Sequencer | [protected] |
| minimizationQuenchVelocity(void) | Sequencer | [protected] |
| minimize() | Sequencer | [protected] |
| newMinimizeDirection(BigReal) | Sequencer | [protected] |
| newMinimizePosition(BigReal) | Sequencer | [protected] |
| pairlistsAge | Sequencer | [protected] |
| pairlistsAreValid | Sequencer | [protected] |
| patch | Sequencer | [protected] |
| pressureProfileReduction | Sequencer | [protected] |
| quenchVelocities() | Sequencer | [protected] |
| random | Sequencer | [protected] |
| rattle1(BigReal, int) | Sequencer | [protected] |
| rattle2(BigReal, int) | Sequencer | [protected] |
| reassignVelocities(BigReal, int) | Sequencer | [protected] |
| rebalanceLoad(int timestep) | Sequencer | [protected] |
| redistrib_swm4_forces(const int, const int) | Sequencer | [protected] |
| redistrib_tip4p_forces(const int, const int) | Sequencer | [protected] |
| reduction | Sequencer | [protected] |
| reinitVelocities(void) | Sequencer | [protected] |
| reloadCharges() | Sequencer | [protected] |
| rescaleVelocities(int) | Sequencer | [protected] |
| rescaleVelocities_numTemps | Sequencer | [protected] |
| rescaleVelocitiesByFactor(BigReal) | Sequencer | [protected] |
| run(void) | Sequencer | |
| runComputeObjects(int migration=1, int pairlists=0) | Sequencer | [protected] |
| saveForce(const int ftag=Results::normal) | Sequencer | [protected] |
| Sequencer(HomePatch *p) | Sequencer | |
| simParams | Sequencer | [protected] |
| slowFreq | Sequencer | [protected] |
| submitCollections(int step, int zeroVel=0) | Sequencer | [protected] |
| submitHalfstep(int) | Sequencer | [protected] |
| submitMinimizeReductions(int) | Sequencer | [protected] |
| submitMomentum(int step) | Sequencer | [protected] |
| submitReductions(int) | Sequencer | [protected] |
| suspend(void) | Sequencer | [inline] |
| tcoupleVelocities(BigReal, int) | Sequencer | [protected] |
| terminate(void) | Sequencer | [protected] |
| ~Sequencer(void) | Sequencer | [virtual] |
