NAMD
GromacsTopFile Member List

This is the complete list of members for GromacsTopFile, including all inherited members.

getAngle(int num, int *atomi, int *atomj, int *atomk, int *angletype) const GromacsTopFile
getAngleParams(int num, Real *th0, Real *kth, int *funct) const GromacsTopFile
getAtom(int num, int *residue_number, char *residue_name, char *atom_name, char *atom_type, int *atom_typenum, Real *charge, Real *mass) const GromacsTopFile
getAtomParams(int num, char *type) const GromacsTopFileinline
getBond(int num, int *atomi, int *atomj, int *bondtype) const GromacsTopFile
getBondParams(int num, Real *b0, Real *kB, int *funct) const GromacsTopFile
getDihedral(int num, int *atomi, int *atomj, int *atomk, int *atoml, int *type) const GromacsTopFile
getDihedralParams(int num, Real *c, int *mult, int *funct) const GromacsTopFile
getExclusions(int *, int *) const GromacsTopFile
getNumAngleParams() const GromacsTopFileinline
getNumAngles() const GromacsTopFile
getNumAtomParams() const GromacsTopFileinline
getNumAtoms() const GromacsTopFile
getNumBondParams() const GromacsTopFileinline
getNumBonds() const GromacsTopFile
getNumDihedralParams() const GromacsTopFileinline
getNumDihedrals() const GromacsTopFile
getNumExclusions() const GromacsTopFile
getNumGaussPair() const GromacsTopFile
getNumLJPair() const GromacsTopFile
getNumPair() const GromacsTopFile
getPairGaussArrays2(int *indexA, int *indexB, Real *gaussA, Real *gaussMu1, Real *gaussSigma1, Real *gaussMu2, Real *gaussSigma2, Real *gaussRepulsive)GromacsTopFile
getPairLJArrays2(int *indexA, int *indexB, Real *pairC6, Real *pairC12)GromacsTopFile
getSystemName() const GromacsTopFileinline
getVDWParams(int typea, int typeb, Real *c6, Real *c12, Real *c6pair, Real *c7) const GromacsTopFile
GromacsTopFile(char *filename)GromacsTopFile