| AnAngleRestraint() | AnAngleRestraint | |
| ARestraint() | ARestraint | |
| DistributeForce(int WhichGroup, AVector Force, GlobalMasterFreeEnergy &CFE) | ARestraint | |
| EarlyExit(char *Str, int AtomID) | ARestraint | [protected] |
| Get_dU_dLambda() | ARestraint | [inline, virtual] |
| GetAngle(AVector &A, AVector &B, AVector &C) | ARestraint | [protected] |
| GetAngleTarget() | ABoundAngleRestraint | [inline, virtual] |
| GetBound() | ABoundAngleRestraint | [inline] |
| GetDihe(AVector &A, AVector &B, AVector &C, AVector &D) | ARestraint | [protected] |
| GetE(double RefAngle, double LambdaKf=1.0) | AnAngleRestraint | [protected] |
| GetEnergy() | ABoundAngleRestraint | [virtual] |
| GetGrad(int WhichGroup, double RefAngle, double LambdaKf=1.0) | AnAngleRestraint | [protected] |
| GetGradient(int WhichGroup) | ABoundAngleRestraint | [virtual] |
| GetKf() | ARestraint | [inline] |
| GetLambdaKf() | ARestraint | [inline] |
| GetLambdaRef() | ARestraint | [inline] |
| GetNumGroups() | ARestraint | [inline] |
| GetRefAngle() | ABoundAngleRestraint | [inline] |
| GetStr(char *Str) | ABoundAngleRestraint | [inline, virtual] |
| IsForcing() | ARestraint | [inline, virtual] |
| m_Kf | ARestraint | [protected] |
| m_LambdaKf | ARestraint | [protected, static] |
| m_LambdaRef | ARestraint | [protected, static] |
| m_NumGroups | ARestraint | [protected] |
| m_pCOMs | ARestraint | [protected] |
| m_pGroups | ARestraint | [protected] |
| PrintInfo() | AnAngleRestraint | [virtual] |
| SetBound(Bound_t Bound) | ABoundAngleRestraint | [inline, virtual] |
| SetGroup(AGroup &Group, int GroupIndex) | ARestraint | |
| SetGroups(AGroup &Group1) | ARestraint | |
| SetGroups(AGroup &Group1, AGroup &Group2) | ARestraint | |
| SetGroups(AGroup &Group1, AGroup &Group2, AGroup &Group3) | ARestraint | |
| SetGroups(AGroup &Group1, AGroup &Group2, AGroup &Group3, AGroup &Group4) | ARestraint | |
| SetIntervalAngle(double) | ARestraint | [inline, virtual] |
| SetKf(double Kf) | ARestraint | [inline] |
| SetLambdaKf(double LambdaKf) | ARestraint | [inline] |
| SetLambdaRef(double LambdaRef) | ARestraint | [inline] |
| SetLowerAngle(double) | ARestraint | [inline, virtual] |
| SetRefAngle(double Angle) | ABoundAngleRestraint | [inline, virtual] |
| SetRefDist(double) | ARestraint | [inline, virtual] |
| SetRefPos(AVector) | ARestraint | [inline, virtual] |
| SetStartAngle(double) | ARestraint | [inline, virtual] |
| SetStartDist(double) | ARestraint | [inline, virtual] |
| SetStartPos(AVector) | ARestraint | [inline, virtual] |
| SetStopAngle(double) | ARestraint | [inline, virtual] |
| SetStopDist(double) | ARestraint | [inline, virtual] |
| SetStopPos(AVector) | ARestraint | [inline, virtual] |
| SetUpperAngle(double) | ARestraint | [inline, virtual] |
| UpdateCOMs(GlobalMasterFreeEnergy &CFE) | ARestraint | |
| ~ARestraint() | ARestraint | [virtual] |
