version 1.1089 | version 1.1090 |
---|
| |
} | } |
#endif // OPENATOM_VERSION | #endif // OPENATOM_VERSION |
| |
| if (simParameters->qmForcesOn){ |
| |
| #ifdef MEM_OPT_VERSION |
| NAMD_die("QM forces are not supported in memory-optimized builds."); |
| #endif |
| |
| molecule->set_qm_replaceAll(simParameters->qmReplaceAll); |
| |
| if (simParameters->qmParamPDBDefined) |
| molecule->prepare_qm(simParameters->qmParamPDB, |
| parameters, configList); |
| else if (pdbFilename) |
| molecule->prepare_qm(pdbFilename, |
| parameters, configList); |
| else |
| molecule->prepare_qm(configList->find("coordinates")->data, |
| parameters, configList); |
| |
| } |
| |
| |
if (simParameters->LJcorrection) { | if (simParameters->LJcorrection) { |
molecule->compute_LJcorrection(); | molecule->compute_LJcorrection(); |
} | } |