version 1.190 | version 1.191 |
---|
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
src/PressureProfile.h \ | src/PressureProfile.h \ |
src/Debug.h | src/Debug.h |
$(CXX) $(CXXFLAGS) $(COPTO)obj/ComputeCrossterms.o $(COPTC) src/ComputeCrossterms.C | $(CXX) $(CXXFLAGS) $(COPTO)obj/ComputeCrossterms.o $(COPTC) src/ComputeCrossterms.C |
| obj/ComputeCUDAMgr.o: \ |
| obj/.exists \ |
| src/ComputeCUDAMgr.C \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/Node.h \ |
| src/main.h \ |
| src/ProcessorPrivate.h \ |
| src/BOCgroup.h \ |
| inc/Node.decl.h \ |
| src/ComputeCUDAMgr.h \ |
| src/CudaUtils.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
| src/CudaComputeNonbonded.h \ |
| src/Compute.h \ |
| src/Box.h \ |
| src/OwnerBox.h \ |
| src/PatchTypes.h \ |
| src/Lattice.h \ |
| src/Tensor.h \ |
| src/ComputeNonbondedUtil.h \ |
| src/ReductionMgr.h \ |
| src/Molecule.h \ |
| src/parm.h \ |
| src/structures.h \ |
| src/ConfigList.h \ |
| src/UniqueSet.h \ |
| src/UniqueSetRaw.h \ |
| src/Hydrogen.h \ |
| src/SortableResizeArray.h \ |
| src/GromacsTopFile.h \ |
| src/GridForceGrid.h \ |
| src/SimParameters.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/InfoStream.h \ |
| src/MStream.h \ |
| plugins/include/molfile_plugin.h \ |
| plugins/include/vmdplugin.h \ |
| src/CudaTileListKernel.h \ |
| src/CudaComputeNonbondedKernel.h \ |
| src/CudaComputeGBISKernel.h \ |
| src/ComputeMgr.h \ |
| src/GlobalMaster.h \ |
| src/GlobalMasterServer.h \ |
| inc/ComputeMgr.decl.h \ |
| src/DeviceCUDA.h \ |
| inc/ComputeCUDAMgr.def.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/ComputeCUDAMgr.o $(COPTC) src/ComputeCUDAMgr.C |
obj/ComputeCylindricalBC.o: \ | obj/ComputeCylindricalBC.o: \ |
obj/.exists \ | obj/.exists \ |
src/ComputeCylindricalBC.C \ | src/ComputeCylindricalBC.C \ |
| |
src/PmeBase.h \ | src/PmeBase.h \ |
src/MathArray.h \ | src/MathArray.h \ |
src/Array.h \ | src/Array.h \ |
| src/ComputePmeCUDA.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/ComputeCUDAMgr.h \ |
| src/CudaUtils.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
| src/CudaComputeNonbonded.h \ |
| src/CudaTileListKernel.h \ |
| src/CudaComputeNonbondedKernel.h \ |
| src/CudaComputeGBISKernel.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeSolver.h \ |
| src/PmeSolverUtil.h \ |
| inc/PmeSolver.decl.h \ |
src/OptPme.h \ | src/OptPme.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
| |
src/ComputePmeCUDAKernel.h \ | src/ComputePmeCUDAKernel.h \ |
inc/ComputePmeMgr.def.h | inc/ComputePmeMgr.def.h |
$(CXX) $(CXXFLAGS) $(COPTO)obj/ComputePme.o $(COPTC) src/ComputePme.C | $(CXX) $(CXXFLAGS) $(COPTO)obj/ComputePme.o $(COPTC) src/ComputePme.C |
| obj/ComputePmeCUDA.o: \ |
| obj/.exists \ |
| src/ComputePmeCUDA.C \ |
| src/Node.h \ |
| src/main.h \ |
| src/ProcessorPrivate.h \ |
| src/BOCgroup.h \ |
| inc/Node.decl.h \ |
| src/SimParameters.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/Lattice.h \ |
| src/NamdTypes.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/Tensor.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/InfoStream.h \ |
| src/MStream.h \ |
| src/Priorities.h \ |
| src/ComputeNonbondedUtil.h \ |
| src/ReductionMgr.h \ |
| src/Molecule.h \ |
| src/parm.h \ |
| src/structures.h \ |
| src/ConfigList.h \ |
| src/UniqueSet.h \ |
| src/UniqueSetRaw.h \ |
| src/Hydrogen.h \ |
| src/SortableResizeArray.h \ |
| src/GromacsTopFile.h \ |
| src/GridForceGrid.h \ |
| plugins/include/molfile_plugin.h \ |
| plugins/include/vmdplugin.h \ |
| src/ComputePmeCUDA.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/PatchTypes.h \ |
| src/Compute.h \ |
| src/Box.h \ |
| src/OwnerBox.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeSolver.h \ |
| src/PatchMap.h \ |
| src/HomePatchList.h \ |
| src/SortedArray.h \ |
| src/ResizeArrayIter.h \ |
| src/PmeSolverUtil.h \ |
| inc/PmeSolver.decl.h \ |
| src/HomePatch.h \ |
| src/Patch.h \ |
| src/UniqueSortedArray.h \ |
| src/MigrateAtomsMsg.h \ |
| src/Migration.h \ |
| inc/PatchMgr.decl.h \ |
| src/Settle.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/ComputePmeCUDA.o $(COPTC) src/ComputePmeCUDA.C |
| obj/ComputePmeCUDAMgr.o: \ |
| obj/.exists \ |
| src/ComputePmeCUDAMgr.C \ |
| src/Node.h \ |
| src/main.h \ |
| src/ProcessorPrivate.h \ |
| src/BOCgroup.h \ |
| inc/Node.decl.h \ |
| src/PatchMap.h \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/HomePatchList.h \ |
| src/SortedArray.h \ |
| src/SortableResizeArray.h \ |
| src/ResizeArrayIter.h \ |
| src/Lattice.h \ |
| src/Tensor.h \ |
| src/WorkDistrib.h \ |
| src/ComputeMap.h \ |
| inc/WorkDistrib.decl.h \ |
| src/Priorities.h \ |
| src/CudaUtils.h \ |
| src/SimParameters.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/InfoStream.h \ |
| src/MStream.h \ |
| src/CudaPmeSolverUtil.h \ |
| src/PmeSolverUtil.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/CudaPmeSolverUtilKernel.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeSolver.h \ |
| src/ReductionMgr.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/CudaPmeSolver.h \ |
| inc/CudaPmeSolver.decl.h \ |
| src/ComputePmeCUDA.h \ |
| src/PatchTypes.h \ |
| src/Compute.h \ |
| src/Box.h \ |
| src/OwnerBox.h \ |
| src/DeviceCUDA.h \ |
| inc/ComputePmeCUDAMgr.def.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/ComputePmeCUDAMgr.o $(COPTC) src/ComputePmeCUDAMgr.C |
obj/OptPme.o: \ | obj/OptPme.o: \ |
obj/.exists \ | obj/.exists \ |
src/OptPme.C \ | src/OptPme.C \ |
| |
src/ComputeNonbondedMICKernel.h \ | src/ComputeNonbondedMICKernel.h \ |
src/Debug.h | src/Debug.h |
$(CXX) $(CXXTHREADFLAGS) $(COPTO)obj/Controller.o $(COPTC) src/Controller.C | $(CXX) $(CXXTHREADFLAGS) $(COPTO)obj/Controller.o $(COPTC) src/Controller.C |
| obj/CudaComputeNonbonded.o: \ |
| obj/.exists \ |
| src/CudaComputeNonbonded.C \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/Patch.h \ |
| src/OwnerBox.h \ |
| src/Box.h \ |
| src/UniqueSortedArray.h \ |
| src/SortedArray.h \ |
| src/SortableResizeArray.h \ |
| src/Lattice.h \ |
| src/Tensor.h \ |
| src/PatchTypes.h \ |
| src/PatchMap.h \ |
| src/HomePatchList.h \ |
| src/ResizeArrayIter.h \ |
| src/ProcessorPrivate.h \ |
| src/BOCgroup.h \ |
| src/ProxyMgr.h \ |
| src/main.h \ |
| src/UniqueSet.h \ |
| src/UniqueSetRaw.h \ |
| src/UniqueSetIter.h \ |
| src/InfoStream.h \ |
| inc/ProxyMgr.decl.h \ |
| src/LJTable.h \ |
| src/Node.h \ |
| inc/Node.decl.h \ |
| src/ObjectArena.h \ |
| src/ReductionMgr.h \ |
| src/CudaComputeNonbonded.h \ |
| src/Compute.h \ |
| src/CudaUtils.h \ |
| src/ComputeNonbondedUtil.h \ |
| src/Molecule.h \ |
| src/parm.h \ |
| src/structures.h \ |
| src/ConfigList.h \ |
| src/Hydrogen.h \ |
| src/GromacsTopFile.h \ |
| src/GridForceGrid.h \ |
| src/SimParameters.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/MStream.h \ |
| plugins/include/molfile_plugin.h \ |
| plugins/include/vmdplugin.h \ |
| src/CudaTileListKernel.h \ |
| src/CudaComputeNonbondedKernel.h \ |
| src/CudaComputeGBISKernel.h \ |
| src/ComputeMgr.h \ |
| src/GlobalMaster.h \ |
| src/GlobalMasterServer.h \ |
| inc/ComputeMgr.decl.h \ |
| src/WorkDistrib.h \ |
| src/ComputeMap.h \ |
| inc/WorkDistrib.decl.h \ |
| src/HomePatch.h \ |
| src/MigrateAtomsMsg.h \ |
| src/Migration.h \ |
| inc/PatchMgr.decl.h \ |
| src/Settle.h \ |
| src/Priorities.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/PmeSolver.h \ |
| src/PmeSolverUtil.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/DeviceCUDA.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/CudaComputeNonbonded.o $(COPTC) src/CudaComputeNonbonded.C |
| obj/CudaPmeSolver.o: \ |
| obj/.exists \ |
| src/CudaPmeSolver.C \ |
| src/Node.h \ |
| src/main.h \ |
| src/ProcessorPrivate.h \ |
| src/BOCgroup.h \ |
| inc/Node.decl.h \ |
| src/Priorities.h \ |
| src/ComputeNonbondedUtil.h \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/ReductionMgr.h \ |
| src/Molecule.h \ |
| src/parm.h \ |
| src/structures.h \ |
| src/ConfigList.h \ |
| src/UniqueSet.h \ |
| src/UniqueSetRaw.h \ |
| src/Hydrogen.h \ |
| src/SortableResizeArray.h \ |
| src/GromacsTopFile.h \ |
| src/GridForceGrid.h \ |
| src/Tensor.h \ |
| src/SimParameters.h \ |
| src/Lattice.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/InfoStream.h \ |
| src/MStream.h \ |
| plugins/include/molfile_plugin.h \ |
| plugins/include/vmdplugin.h \ |
| src/CudaPmeSolverUtil.h \ |
| src/PmeSolverUtil.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/CudaUtils.h \ |
| src/CudaPmeSolverUtilKernel.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeSolver.h \ |
| src/PatchMap.h \ |
| src/HomePatchList.h \ |
| src/SortedArray.h \ |
| src/ResizeArrayIter.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/CudaPmeSolver.h \ |
| inc/CudaPmeSolver.decl.h \ |
| src/DeviceCUDA.h \ |
| inc/CudaPmeSolver.def.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/CudaPmeSolver.o $(COPTC) src/CudaPmeSolver.C |
| obj/CudaPmeSolverUtil.o: \ |
| obj/.exists \ |
| src/CudaPmeSolverUtil.C \ |
| src/ComputeNonbondedUtil.h \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/ReductionMgr.h \ |
| src/main.h \ |
| src/BOCgroup.h \ |
| src/ProcessorPrivate.h \ |
| src/Molecule.h \ |
| src/parm.h \ |
| src/structures.h \ |
| src/ConfigList.h \ |
| src/UniqueSet.h \ |
| src/UniqueSetRaw.h \ |
| src/Hydrogen.h \ |
| src/SortableResizeArray.h \ |
| src/GromacsTopFile.h \ |
| src/GridForceGrid.h \ |
| src/Tensor.h \ |
| src/SimParameters.h \ |
| src/Lattice.h \ |
| src/MGridforceParams.h \ |
| src/strlib.h \ |
| src/InfoStream.h \ |
| src/MStream.h \ |
| plugins/include/molfile_plugin.h \ |
| plugins/include/vmdplugin.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/PmeSolver.h \ |
| src/PatchMap.h \ |
| src/HomePatchList.h \ |
| src/SortedArray.h \ |
| src/ResizeArrayIter.h \ |
| src/PmeSolverUtil.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| src/CudaPmeSolver.h \ |
| inc/CudaPmeSolver.decl.h \ |
| src/CudaPmeSolverUtil.h \ |
| src/CudaUtils.h \ |
| src/CudaPmeSolverUtilKernel.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/CudaPmeSolverUtil.o $(COPTC) src/CudaPmeSolverUtil.C |
obj/CudaUtils.o: \ | obj/CudaUtils.o: \ |
obj/.exists \ | obj/.exists \ |
src/CudaUtils.C \ | src/CudaUtils.C \ |
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
inc/BroadcastMgr.decl.h \ | inc/BroadcastMgr.decl.h \ |
src/BroadcastClient.h \ | src/BroadcastClient.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
inc/ComputeGridForceMgr.decl.h \ | inc/ComputeGridForceMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
src/Sync.h \ | src/Sync.h \ |
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
src/InfoStream.h \ | src/InfoStream.h \ |
src/MStream.h | src/MStream.h |
$(CXX) $(CXXFLAGS) $(COPTO)obj/PmeRealSpace.o $(COPTC) src/PmeRealSpace.C | $(CXX) $(CXXFLAGS) $(COPTO)obj/PmeRealSpace.o $(COPTC) src/PmeRealSpace.C |
| obj/PmeSolver.o: \ |
| obj/.exists \ |
| src/PmeSolver.C \ |
| src/Priorities.h \ |
| src/PmeSolver.h \ |
| src/ReductionMgr.h \ |
| src/main.h \ |
| src/NamdTypes.h \ |
| src/common.h \ |
| src/Vector.h \ |
| src/ResizeArray.h \ |
| src/ResizeArrayRaw.h \ |
| src/BOCgroup.h \ |
| src/ProcessorPrivate.h \ |
| src/PatchMap.h \ |
| src/HomePatchList.h \ |
| src/SortedArray.h \ |
| src/SortableResizeArray.h \ |
| src/ResizeArrayIter.h \ |
| src/Lattice.h \ |
| src/Tensor.h \ |
| src/PmeSolverUtil.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| inc/PmeSolver.decl.h \ |
| inc/PmeSolver.def.h |
| $(CXX) $(CXXFLAGS) $(COPTO)obj/PmeSolver.o $(COPTC) src/PmeSolver.C |
obj/ProcessorPrivate.o: \ | obj/ProcessorPrivate.o: \ |
obj/.exists \ | obj/.exists \ |
src/ProcessorPrivate.C \ | src/ProcessorPrivate.C \ |
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
inc/NamdDummyLB.decl.h \ | inc/NamdDummyLB.decl.h \ |
inc/ComputeMgr.decl.h \ | inc/ComputeMgr.decl.h \ |
inc/ComputePmeMgr.decl.h \ | inc/ComputePmeMgr.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| inc/CudaPmeSolver.decl.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputeCUDAMgr.decl.h \ |
inc/OptPmeMgr.decl.h \ | inc/OptPmeMgr.decl.h \ |
inc/PmeFFTLib.decl.h \ | inc/PmeFFTLib.decl.h \ |
inc/ComputeExtMgr.decl.h \ | inc/ComputeExtMgr.decl.h \ |
| |
inc/ProxyMgr.decl.h \ | inc/ProxyMgr.decl.h \ |
src/Priorities.h \ | src/Priorities.h \ |
src/SortAtoms.h \ | src/SortAtoms.h \ |
| src/ComputePmeCUDAMgr.h \ |
| src/PmeBase.h \ |
| src/MathArray.h \ |
| src/Array.h \ |
| src/PmeSolver.h \ |
| src/ReductionMgr.h \ |
| src/PmeSolverUtil.h \ |
| inc/PmeSolver.decl.h \ |
| inc/ComputePmeCUDAMgr.decl.h \ |
| src/DeviceCUDA.h \ |
src/Debug.h \ | src/Debug.h \ |
inc/WorkDistrib.def.h | inc/WorkDistrib.def.h |
$(CXX) $(CXXFLAGS) $(COPTO)obj/WorkDistrib.o $(COPTC) src/WorkDistrib.C | $(CXX) $(CXXFLAGS) $(COPTO)obj/WorkDistrib.o $(COPTC) src/WorkDistrib.C |
| |
src/Random.h \ | src/Random.h \ |
inc/ParallelIOMgr.def.h | inc/ParallelIOMgr.def.h |
$(CXX) $(CXXFLAGS) $(COPTO)obj/ParallelIOMgr.o $(COPTC) src/ParallelIOMgr.C | $(CXX) $(CXXFLAGS) $(COPTO)obj/ParallelIOMgr.o $(COPTC) src/ParallelIOMgr.C |
| obj/ComputeNonbondedCUDAKernel.o: \ |
| obj/.exists \ |
| src/ComputeNonbondedCUDAKernel.cu \ |
| src/CudaUtils.h \ |
| src/ComputeNonbondedCUDAKernel.h \ |
| src/ComputeNonbondedCUDAKernelBase.h \ |
| src/ComputeGBISCUDAKernel.h \ |
| src/ComputeGBIS.inl |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/ComputeNonbondedCUDAKernel.o $(COPTC) `$(NATIVEPATH) src/`ComputeNonbondedCUDAKernel.cu |
| obj/ComputePmeCUDAKernel.o: \ |
| obj/.exists \ |
| src/ComputePmeCUDAKernel.cu \ |
| src/ComputePmeCUDAKernel.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/ComputePmeCUDAKernel.o $(COPTC) `$(NATIVEPATH) src/`ComputePmeCUDAKernel.cu |
| obj/CudaComputeGBISKernel.o: \ |
| obj/.exists \ |
| src/CudaComputeGBISKernel.cu \ |
| src/CudaUtils.h \ |
| src/CudaTileListKernel.h \ |
| src/CudaComputeGBISKernel.h \ |
| src/ComputeGBIS.inl \ |
| src/DeviceCUDA.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/CudaComputeGBISKernel.o $(COPTC) `$(NATIVEPATH) src/`CudaComputeGBISKernel.cu |
| obj/CudaComputeNonbondedKernel.o: \ |
| obj/.exists \ |
| src/CudaComputeNonbondedKernel.cu \ |
| src/CudaComputeNonbondedKernel.h \ |
| src/CudaUtils.h \ |
| src/CudaTileListKernel.h \ |
| src/DeviceCUDA.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/CudaComputeNonbondedKernel.o $(COPTC) `$(NATIVEPATH) src/`CudaComputeNonbondedKernel.cu |
| obj/CudaPmeSolverUtilKernel.o: \ |
| obj/.exists \ |
| src/CudaPmeSolverUtilKernel.cu \ |
| src/CudaUtils.h \ |
| src/CudaPmeSolverUtilKernel.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/CudaPmeSolverUtilKernel.o $(COPTC) `$(NATIVEPATH) src/`CudaPmeSolverUtilKernel.cu |
| obj/CudaTileListKernel.o: \ |
| obj/.exists \ |
| src/CudaTileListKernel.cu \ |
| src/CudaUtils.h \ |
| src/CudaTileListKernel.h \ |
| src/DeviceCUDA.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/CudaTileListKernel.o $(COPTC) `$(NATIVEPATH) src/`CudaTileListKernel.cu |
| obj/DeviceCUDAkernel.o: \ |
| obj/.exists \ |
| src/DeviceCUDAkernel.cu \ |
| src/CudaUtils.h |
| $(CUDACC) $(CUDACCOPTS) -Xptxas -v $(COPTO)obj/DeviceCUDAkernel.o $(COPTC) `$(NATIVEPATH) src/`DeviceCUDAkernel.cu |
obj/dcdplugin.o: \ | obj/dcdplugin.o: \ |
obj/.exists \ | obj/.exists \ |
plugins/molfile_plugin/src/dcdplugin.c \ | plugins/molfile_plugin/src/dcdplugin.c \ |