Structural Biology Software Database
Structural Biology Software Database

Application Index Record

Category: Protein Structure Analysis and Verification
Sequery
Last Update: 05-07-2009

Description:
Sequery is a tool to search the sequences of the protein structures in the Protein Data Bank (PDB) for a particular pattern of residues, which may include exact matches and acceptable substitutions based on a user-specified amino acid substitution matrix and/or a numerical threshold. Sequery was developed by Michael E. Pique, Michael A. Siani, Leslie A. Kuhn, Elizabeth D. Getzoff, and John A. Tainer, Department of Molecular Biology, The Scripps Research Institute and is distributed here with permission of the authors.

Homepage:
http://www.bch.msu.edu/~kuhn/software/sequery/index.html

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